Package: sgs 0.3.2

sgs: Sparse-Group SLOPE: Adaptive Bi-Level Selection with FDR Control

Implementation of Sparse-group SLOPE (SGS) (Feser and Evangelou (2023) <doi:10.48550/arXiv.2305.09467>) models. Linear and logistic regression models are supported, both of which can be fit using k-fold cross-validation. Dense and sparse input matrices are supported. In addition, a general Adaptive Three Operator Splitting (ATOS) (Pedregosa and Gidel (2018) <doi:10.48550/arXiv.1804.02339>) implementation is provided. Group SLOPE (gSLOPE) (Brzyski et al. (2019) <doi:10.1080/01621459.2017.1411269>) and group-based OSCAR models (Feser and Evangelou (2024) <doi:10.48550/arXiv.2405.15357>) are also implemented. All models are available with strong screening rules (Feser and Evangelou (2024) <doi:10.48550/arXiv.2405.15357>) for computational speed-up.

Authors:Fabio Feser [aut, cre]

sgs_0.3.2.tar.gz
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sgs.pdf |sgs.html
sgs/json (API)

# Install 'sgs' in R:
install.packages('sgs', repos = c('https://ff1201.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/ff1201/sgs/issues

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library

On CRAN:

openblascppopenmp

4.77 score 1 stars 1 packages 13 scripts 250 downloads 15 exports 78 dependencies

Last updated 2 months agofrom:f8a72f2e39. Checks:11 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 27 2025
R-4.5-win-x86_64OKJan 27 2025
R-4.5-mac-x86_64OKJan 27 2025
R-4.5-mac-aarch64OKJan 27 2025
R-4.5-linux-x86_64OKJan 27 2025
R-4.4-win-x86_64OKJan 27 2025
R-4.4-mac-x86_64OKJan 27 2025
R-4.4-mac-aarch64OKJan 27 2025
R-4.3-win-x86_64OKJan 27 2025
R-4.3-mac-x86_64OKJan 27 2025
R-4.3-mac-aarch64OKDec 28 2024

Exports:arma_mvarma_sparseas_sgsatosfit_goscarfit_goscar_cvfit_gslopefit_gslope_cvfit_sgofit_sgo_cvfit_sgsfit_sgs_cvgen_pensgen_toy_datascaled_sgs

Dependencies:caretclasscliclockcodetoolscolorspacecpp11data.tablediagramdigestdplyre1071fansifarverforeachfuturefuture.applygenericsggplot2globalsgluegowergtablehardhatipredisobanditeratorsKernSmoothlabelinglatticelavalifecyclelistenvlubridatemagrittrMASSMatrixmgcvModelMetricsmunsellnlmennetnumDerivparallellypillarpkgconfigplyrpROCprodlimprogressrproxypurrrR6RColorBrewerRcppRcppArmadillorecipesreshape2RlabrlangrpartscalesshapeSLOPESQUAREMstringistringrsurvivaltibbletidyrtidyselecttimechangetimeDatetzdbutf8vctrsviridisLitewithr

sgs reproducible example

Rendered fromreproducible_example.Rmdusingknitr::rmarkdownon Jan 27 2025.

Last update: 2024-09-25
Started: 2024-09-25